Cluster: CGMR088508_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088508
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_38563 | k141_38563_9 | 5884 | 6831 | - | 1.A.35.3.2 |
| TC | k141_38563 | k141_38563_10 | 6889 | 8472 | - | 3.A.18.1.1 |
| CAZyme | k141_38563 | k141_38563_11 | 9375 | 10637 | + | GH27 |
| NULL(UNKNOWN) | k141_38563 | k141_38563_12 | 10722 | 12035 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_38563 | k141_38563_13 | 12032 | 12589 | - | Sigma70_r2 | Sigma70_r4_2 |
| TC | k141_38563 | k141_38563_14 | 12773 | 15352 | - | 3.A.9.1.2 |
Gene ID: k141_38563_9
Type: TC
Location: 5884 - 6831 (-)
Type: TC
Location: 5884 - 6831 (-)
Gene ID: k141_38563_10
Type: TC
Location: 6889 - 8472 (-)
Type: TC
Location: 6889 - 8472 (-)
Gene ID: k141_38563_11
Type: CAZyme
Location: 9375 - 10637 (+)
Type: CAZyme
Location: 9375 - 10637 (+)
Gene ID: k141_38563_12
Type:
Location: 10722 - 12035 (-)
Type:
Location: 10722 - 12035 (-)
Gene ID: k141_38563_13
Type: STP
Location: 12032 - 12589 (-)
Type: STP
Location: 12032 - 12589 (-)
Gene ID: k141_38563_14
Type: TC
Location: 12773 - 15352 (-)
Type: TC
Location: 12773 - 15352 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.