Cluster: CGMR088508_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR088508
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1204646 | k141_1204646_13 | 14571 | 15938 | + | 2.A.38.1.1 |
| TC | k141_1204646 | k141_1204646_14 | 15954 | 17390 | + | 2.A.38.1.1 |
| peptidase | k141_1204646 | k141_1204646_15 | 17424 | 18164 | + | G05.UPW |
| CAZyme | k141_1204646 | k141_1204646_16 | 18284 | 20623 | - | GH31_3 |
| TF | k141_1204646 | k141_1204646_17 | 20830 | 21732 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_1204646 | k141_1204646_18 | 21729 | 23705 | - | PL33_1 |
Gene ID: k141_1204646_13
Type: TC
Location: 14571 - 15938 (+)
Type: TC
Location: 14571 - 15938 (+)
Gene ID: k141_1204646_14
Type: TC
Location: 15954 - 17390 (+)
Type: TC
Location: 15954 - 17390 (+)
Gene ID: k141_1204646_15
Type: peptidase
Location: 17424 - 18164 (+)
Type: peptidase
Location: 17424 - 18164 (+)
Gene ID: k141_1204646_16
Type: CAZyme
Location: 18284 - 20623 (-)
Type: CAZyme
Location: 18284 - 20623 (-)
Gene ID: k141_1204646_17
Type: TF
Location: 20830 - 21732 (+)
Type: TF
Location: 20830 - 21732 (+)
Gene ID: k141_1204646_18
Type: CAZyme
Location: 21729 - 23705 (-)
Type: CAZyme
Location: 21729 - 23705 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.