Cluster: CGMR088508_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR088508
- CGC Family ID: CGCFAM_03779
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_23114 | k141_23114_1 | 798 | 1796 | + | 8.A.5.1.6 |
| CAZyme | k141_23114 | k141_23114_2 | 1852 | 5370 | + | GH2 |
| CAZyme | k141_23114 | k141_23114_3 | 5485 | 8127 | + | GT2 |
| pfam | k141_23114 | k141_23114_4 | 8188 | 8892 | + | NTP_transferase | IspD | NTP_transf_3 |
| pfam | k141_23114 | k141_23114_5 | 8904 | 9929 | + | ADH_zinc_N | ADH_N |
| CAZyme | k141_23114 | k141_23114_6 | 9957 | 11321 | + | GT2 |
Gene ID: k141_23114_1
Type: TC
Location: 798 - 1796 (+)
Type: TC
Location: 798 - 1796 (+)
Gene ID: k141_23114_2
Type: CAZyme
Location: 1852 - 5370 (+)
Type: CAZyme
Location: 1852 - 5370 (+)
Gene ID: k141_23114_3
Type: CAZyme
Location: 5485 - 8127 (+)
Type: CAZyme
Location: 5485 - 8127 (+)
Gene ID: k141_23114_4
Type: pfam
Location: 8188 - 8892 (+)
Type: pfam
Location: 8188 - 8892 (+)
Gene ID: k141_23114_5
Type: pfam
Location: 8904 - 9929 (+)
Type: pfam
Location: 8904 - 9929 (+)
Gene ID: k141_23114_6
Type: CAZyme
Location: 9957 - 11321 (+)
Type: CAZyme
Location: 9957 - 11321 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.