Cluster: CGMR088508_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR088508
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1065612 | k141_1065612_15 | 15941 | 17653 | + | GH18 |
| pfam | k141_1065612 | k141_1065612_16 | 17710 | 18504 | + | NodS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| pfam | k141_1065612 | k141_1065612_17 | 18522 | 19397 | + | HSP33 |
| CAZyme | k141_1065612 | k141_1065612_18 | 19414 | 21816 | + | GH73 |
| NULL(UNKNOWN) | k141_1065612 | k141_1065612_19 | 21782 | 22648 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_1065612 | k141_1065612_20 | 22729 | 23130 | + | GntR |
| TC | k141_1065612 | k141_1065612_21 | 23141 | 25588 | + | 3.A.9.1.2 |
Gene ID: k141_1065612_15
Type: CAZyme
Location: 15941 - 17653 (+)
Type: CAZyme
Location: 15941 - 17653 (+)
Gene ID: k141_1065612_16
Type: pfam
Location: 17710 - 18504 (+)
Type: pfam
Location: 17710 - 18504 (+)
Gene ID: k141_1065612_17
Type: pfam
Location: 18522 - 19397 (+)
Type: pfam
Location: 18522 - 19397 (+)
Gene ID: k141_1065612_18
Type: CAZyme
Location: 19414 - 21816 (+)
Type: CAZyme
Location: 19414 - 21816 (+)
Gene ID: k141_1065612_19
Type:
Location: 21782 - 22648 (+)
Type:
Location: 21782 - 22648 (+)
Gene ID: k141_1065612_20
Type: TF
Location: 22729 - 23130 (+)
Type: TF
Location: 22729 - 23130 (+)
Gene ID: k141_1065612_21
Type: TC
Location: 23141 - 25588 (+)
Type: TC
Location: 23141 - 25588 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.