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Cluster: CGMR088508_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_472684 k141_472684_6 4801 7551 - GH2
pfam k141_472684 k141_472684_7 7728 8945 + Methyltransf_21
STP k141_472684 k141_472684_8 9048 9827 + MCPsignal
CAZyme k141_472684 k141_472684_9 9861 10895 + GH5_37
CAZyme k141_472684 k141_472684_10 11016 13409 - GH94
NULL(UNKNOWN) k141_472684 k141_472684_11 13623 14657 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_472684 k141_472684_12 14969 15607 + 2.A.107.3.1
TC k141_472684 k141_472684_13 15572 18235 - 3.A.3.2.21
STP k141_472684 k141_472684_14 18403 19779 + PALP
TC k141_472684 k141_472684_15 19849 21636 + 1.B.52.2.1
CAZyme k141_472684 k141_472684_16 21755 23038 - GH18
Gene ID: k141_472684_6
Type: CAZyme
Location: 4801 - 7551 (-)
Gene ID: k141_472684_7
Type: pfam
Location: 7728 - 8945 (+)
Gene ID: k141_472684_8
Type: STP
Location: 9048 - 9827 (+)
Gene ID: k141_472684_9
Type: CAZyme
Location: 9861 - 10895 (+)
Gene ID: k141_472684_10
Type: CAZyme
Location: 11016 - 13409 (-)
Gene ID: k141_472684_11
Type:
Location: 13623 - 14657 (-)
Gene ID: k141_472684_12
Type: TC
Location: 14969 - 15607 (+)
Gene ID: k141_472684_13
Type: TC
Location: 15572 - 18235 (-)
Gene ID: k141_472684_14
Type: STP
Location: 18403 - 19779 (+)
Gene ID: k141_472684_15
Type: TC
Location: 19849 - 21636 (+)
Gene ID: k141_472684_16
Type: CAZyme
Location: 21755 - 23038 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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