Cluster: CGMR088508_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR088508
- CGC Family ID: CGCFAM_07132
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_528666 | k141_528666_4 | 2466 | 4901 | - | GH94 |
| NULL(UNKNOWN) | k141_528666 | k141_528666_5 | 5744 | 7162 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_528666 | k141_528666_6 | 7191 | 8213 | + | 3.A.1.1.4 |
| TC | k141_528666 | k141_528666_7 | 8218 | 9093 | + | 3.A.1.1.36 |
| TC | k141_528666 | k141_528666_8 | 9171 | 9995 | + | 9.B.28.1.2 |
| CAZyme | k141_528666 | k141_528666_9 | 10068 | 10874 | + | CE4 |
| TC | k141_528666 | k141_528666_10 | 10970 | 11614 | + | 9.B.28.1.8 |
Gene ID: k141_528666_4
Type: CAZyme
Location: 2466 - 4901 (-)
Type: CAZyme
Location: 2466 - 4901 (-)
Gene ID: k141_528666_5
Type:
Location: 5744 - 7162 (+)
Type:
Location: 5744 - 7162 (+)
Gene ID: k141_528666_6
Type: TC
Location: 7191 - 8213 (+)
Type: TC
Location: 7191 - 8213 (+)
Gene ID: k141_528666_7
Type: TC
Location: 8218 - 9093 (+)
Type: TC
Location: 8218 - 9093 (+)
Gene ID: k141_528666_8
Type: TC
Location: 9171 - 9995 (+)
Type: TC
Location: 9171 - 9995 (+)
Gene ID: k141_528666_9
Type: CAZyme
Location: 10068 - 10874 (+)
Type: CAZyme
Location: 10068 - 10874 (+)
Gene ID: k141_528666_10
Type: TC
Location: 10970 - 11614 (+)
Type: TC
Location: 10970 - 11614 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.