Cluster: CGMR088508_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088508
- CGC Family ID: CGCFAM_00237
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_930866 | k141_930866_31 | 32774 | 33448 | + | 3.A.1.122.14 |
| TC | k141_930866 | k141_930866_32 | 33445 | 34320 | + | 3.A.1.122.14 |
| CAZyme | k141_930866 | k141_930866_33 | 34434 | 36728 | + | GT2 |
| pfam | k141_930866 | k141_930866_34 | 36997 | 37209 | + | SASP |
| pfam | k141_930866 | k141_930866_35 | 37281 | 38135 | - | QRPTase_C | QRPTase_N |
| TC | k141_930866 | k141_930866_36 | 38128 | 39417 | - | 3.D.10.1.4 |
Gene ID: k141_930866_31
Type: TC
Location: 32774 - 33448 (+)
Type: TC
Location: 32774 - 33448 (+)
Gene ID: k141_930866_32
Type: TC
Location: 33445 - 34320 (+)
Type: TC
Location: 33445 - 34320 (+)
Gene ID: k141_930866_33
Type: CAZyme
Location: 34434 - 36728 (+)
Type: CAZyme
Location: 34434 - 36728 (+)
Gene ID: k141_930866_34
Type: pfam
Location: 36997 - 37209 (+)
Type: pfam
Location: 36997 - 37209 (+)
Gene ID: k141_930866_35
Type: pfam
Location: 37281 - 38135 (-)
Type: pfam
Location: 37281 - 38135 (-)
Gene ID: k141_930866_36
Type: TC
Location: 38128 - 39417 (-)
Type: TC
Location: 38128 - 39417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.