Cluster: CGMR088329_CGC6
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR088329
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_293904 | k141_293904_35 | 35484 | 35969 | + | 1.B.52.2.1 |
| STP | k141_293904 | k141_293904_36 | 36056 | 37873 | - | SIS | SIS |
| pfam | k141_293904 | k141_293904_37 | 38370 | 38954 | + | KTI12 | AAA_33 |
| CAZyme | k141_293904 | k141_293904_38 | 38981 | 39958 | + | GH25 |
| NULL(UNKNOWN) | k141_293904 | k141_293904_39 | 39995 | 40246 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_293904 | k141_293904_40 | 40419 | 41729 | - | GH13_20 |
| pfam | k141_293904 | k141_293904_41 | 41848 | 42429 | + | Amidase_3 | Amidase_3 | SPOR |
| CAZyme | k141_293904 | k141_293904_42 | 42548 | 43342 | + | GH3 |
| sulfatase | k141_293904 | k141_293904_43 | 43495 | 44598 | + | S1_15 |
| CAZyme | k141_293904 | k141_293904_44 | 44602 | 45624 | - | GT2 |
| TC | k141_293904 | k141_293904_45 | 45644 | 46987 | - | 1.A.26.1.2 |
Gene ID: k141_293904_35
Type: TC
Location: 35484 - 35969 (+)
Type: TC
Location: 35484 - 35969 (+)
Gene ID: k141_293904_36
Type: STP
Location: 36056 - 37873 (-)
Type: STP
Location: 36056 - 37873 (-)
Gene ID: k141_293904_37
Type: pfam
Location: 38370 - 38954 (+)
Type: pfam
Location: 38370 - 38954 (+)
Gene ID: k141_293904_38
Type: CAZyme
Location: 38981 - 39958 (+)
Type: CAZyme
Location: 38981 - 39958 (+)
Gene ID: k141_293904_39
Type:
Location: 39995 - 40246 (+)
Type:
Location: 39995 - 40246 (+)
Gene ID: k141_293904_40
Type: CAZyme
Location: 40419 - 41729 (-)
Type: CAZyme
Location: 40419 - 41729 (-)
Gene ID: k141_293904_41
Type: pfam
Location: 41848 - 42429 (+)
Type: pfam
Location: 41848 - 42429 (+)
Gene ID: k141_293904_42
Type: CAZyme
Location: 42548 - 43342 (+)
Type: CAZyme
Location: 42548 - 43342 (+)
Gene ID: k141_293904_43
Type: sulfatase
Location: 43495 - 44598 (+)
Type: sulfatase
Location: 43495 - 44598 (+)
Gene ID: k141_293904_44
Type: CAZyme
Location: 44602 - 45624 (-)
Type: CAZyme
Location: 44602 - 45624 (-)
Gene ID: k141_293904_45
Type: TC
Location: 45644 - 46987 (-)
Type: TC
Location: 45644 - 46987 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.