Cluster: CGMR088329_CGC19
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088329
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_501811 | k141_501811_6 | 5979 | 7355 | - | 2.A.86.1.8 |
| STP | k141_501811 | k141_501811_7 | 7408 | 8733 | - | HATPase_c | HisKA |
| TF | k141_501811 | k141_501811_8 | 8735 | 9415 | - | Trans_reg_C |
| TC | k141_501811 | k141_501811_9 | 9432 | 11087 | - | 2.A.58.2.2 |
| pfam | k141_501811 | k141_501811_10 | 11351 | 11797 | + | NfeD |
| TC | k141_501811 | k141_501811_11 | 11817 | 12755 | + | 8.A.21.2.2 |
| pfam | k141_501811 | k141_501811_12 | 12871 | 14076 | - | Iso_dh |
| pfam | k141_501811 | k141_501811_13 | 14097 | 15497 | - | HMGL-like |
| TC | k141_501811 | k141_501811_14 | 15759 | 16706 | - | 2.A.69.3.6 |
| NULL(UNKNOWN) | k141_501811 | k141_501811_15 | 16699 | 16860 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_501811 | k141_501811_16 | 16863 | 18359 | - | Fer4 | Fer4 |
| CAZyme | k141_501811 | k141_501811_17 | 18608 | 19315 | + | GH23 |
Gene ID: k141_501811_6
Type: TC
Location: 5979 - 7355 (-)
Type: TC
Location: 5979 - 7355 (-)
Gene ID: k141_501811_7
Type: STP
Location: 7408 - 8733 (-)
Type: STP
Location: 7408 - 8733 (-)
Gene ID: k141_501811_8
Type: TF
Location: 8735 - 9415 (-)
Type: TF
Location: 8735 - 9415 (-)
Gene ID: k141_501811_9
Type: TC
Location: 9432 - 11087 (-)
Type: TC
Location: 9432 - 11087 (-)
Gene ID: k141_501811_10
Type: pfam
Location: 11351 - 11797 (+)
Type: pfam
Location: 11351 - 11797 (+)
Gene ID: k141_501811_11
Type: TC
Location: 11817 - 12755 (+)
Type: TC
Location: 11817 - 12755 (+)
Gene ID: k141_501811_12
Type: pfam
Location: 12871 - 14076 (-)
Type: pfam
Location: 12871 - 14076 (-)
Gene ID: k141_501811_13
Type: pfam
Location: 14097 - 15497 (-)
Type: pfam
Location: 14097 - 15497 (-)
Gene ID: k141_501811_14
Type: TC
Location: 15759 - 16706 (-)
Type: TC
Location: 15759 - 16706 (-)
Gene ID: k141_501811_15
Type:
Location: 16699 - 16860 (-)
Type:
Location: 16699 - 16860 (-)
Gene ID: k141_501811_16
Type: STP
Location: 16863 - 18359 (-)
Type: STP
Location: 16863 - 18359 (-)
Gene ID: k141_501811_17
Type: CAZyme
Location: 18608 - 19315 (+)
Type: CAZyme
Location: 18608 - 19315 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.