Cluster: CGMR088329_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR088329
- CGC Family ID: CGCFAM_03248
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_90422 | k141_90422_35 | 35863 | 37296 | + | 3.A.24.3.1 |
| TF | k141_90422 | k141_90422_36 | 37324 | 38340 | + | LacI |
| CAZyme | k141_90422 | k141_90422_37 | 38574 | 39599 | + | GH130_2 |
| pfam | k141_90422 | k141_90422_38 | 39692 | 40861 | + | GlcNAc_2-epim |
| CAZyme | k141_90422 | k141_90422_39 | 40854 | 42035 | + | GH130_1 |
| CAZyme | k141_90422 | k141_90422_40 | 42028 | 43617 | + | CE20 |
Gene ID: k141_90422_35
Type: TC
Location: 35863 - 37296 (+)
Type: TC
Location: 35863 - 37296 (+)
Gene ID: k141_90422_36
Type: TF
Location: 37324 - 38340 (+)
Type: TF
Location: 37324 - 38340 (+)
Gene ID: k141_90422_37
Type: CAZyme
Location: 38574 - 39599 (+)
Type: CAZyme
Location: 38574 - 39599 (+)
Gene ID: k141_90422_38
Type: pfam
Location: 39692 - 40861 (+)
Type: pfam
Location: 39692 - 40861 (+)
Gene ID: k141_90422_39
Type: CAZyme
Location: 40854 - 42035 (+)
Type: CAZyme
Location: 40854 - 42035 (+)
Gene ID: k141_90422_40
Type: CAZyme
Location: 42028 - 43617 (+)
Type: CAZyme
Location: 42028 - 43617 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.