Cluster: CGMR088329_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088329
- CGC Family ID: CGCFAM_02080
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_155883 | k141_155883_75 | 83259 | 85475 | + | 3.A.1.135.6 |
| TC | k141_155883 | k141_155883_76 | 85475 | 87322 | + | 3.A.1.135.6 |
| pfam | k141_155883 | k141_155883_77 | 87680 | 88912 | + | DUF1015 |
| CAZyme | k141_155883 | k141_155883_78 | 88933 | 91131 | + | CBM48 | GH13_9 |
| TC | k141_155883 | k141_155883_79 | 91150 | 92013 | + | 1.A.23.2.1 |
| TC | k141_155883 | k141_155883_80 | 92086 | 94002 | + | 3.A.1.121.4 |
Gene ID: k141_155883_75
Type: TC
Location: 83259 - 85475 (+)
Type: TC
Location: 83259 - 85475 (+)
Gene ID: k141_155883_76
Type: TC
Location: 85475 - 87322 (+)
Type: TC
Location: 85475 - 87322 (+)
Gene ID: k141_155883_77
Type: pfam
Location: 87680 - 88912 (+)
Type: pfam
Location: 87680 - 88912 (+)
Gene ID: k141_155883_78
Type: CAZyme
Location: 88933 - 91131 (+)
Type: CAZyme
Location: 88933 - 91131 (+)
Gene ID: k141_155883_79
Type: TC
Location: 91150 - 92013 (+)
Type: TC
Location: 91150 - 92013 (+)
Gene ID: k141_155883_80
Type: TC
Location: 92086 - 94002 (+)
Type: TC
Location: 92086 - 94002 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.