Cluster: CGMR088329_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088329
- CGC Family ID: CGCFAM_00009
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_91710 | k141_91710_3 | 2275 | 3450 | + | GT4 |
| pfam | k141_91710 | k141_91710_4 | 3453 | 4631 | + | Glyco_trans_1_4 |
| pfam | k141_91710 | k141_91710_5 | 4646 | 5683 | + | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | k141_91710 | k141_91710_6 | 5705 | 6481 | + | 3.A.1.103.6 |
| TC | k141_91710 | k141_91710_7 | 6491 | 7225 | + | 3.A.1.103.1 |
Gene ID: k141_91710_3
Type: CAZyme
Location: 2275 - 3450 (+)
Type: CAZyme
Location: 2275 - 3450 (+)
Gene ID: k141_91710_4
Type: pfam
Location: 3453 - 4631 (+)
Type: pfam
Location: 3453 - 4631 (+)
Gene ID: k141_91710_5
Type: pfam
Location: 4646 - 5683 (+)
Type: pfam
Location: 4646 - 5683 (+)
Gene ID: k141_91710_6
Type: TC
Location: 5705 - 6481 (+)
Type: TC
Location: 5705 - 6481 (+)
Gene ID: k141_91710_7
Type: TC
Location: 6491 - 7225 (+)
Type: TC
Location: 6491 - 7225 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.