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Cluster: CGMR088052_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_133348 k141_133348_1 223 1278 + 9.B.146.1.1
pfam k141_133348 k141_133348_2 1574 2215 - UPF0029 | DUF1949
pfam k141_133348 k141_133348_3 2392 3255 + DegV
TC k141_133348 k141_133348_4 3532 4614 + 3.A.11.1.4
NULL(UNKNOWN) k141_133348 k141_133348_5 4607 5278 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_133348 k141_133348_6 5346 5912 + Ribosomal_S30AE | Ribosom_S30AE_C
TC k141_133348 k141_133348_7 6222 8759 + 3.A.5.1.1
pfam k141_133348 k141_133348_8 9102 10100 + RF-1 | PCRF
CAZyme k141_133348 k141_133348_9 10406 11350 + CBM50
Gene ID: k141_133348_1
Type: TC
Location: 223 - 1278 (+)
Gene ID: k141_133348_2
Type: pfam
Location: 1574 - 2215 (-)
Gene ID: k141_133348_3
Type: pfam
Location: 2392 - 3255 (+)
Gene ID: k141_133348_4
Type: TC
Location: 3532 - 4614 (+)
Gene ID: k141_133348_5
Type:
Location: 4607 - 5278 (+)
Gene ID: k141_133348_6
Type: pfam
Location: 5346 - 5912 (+)
Gene ID: k141_133348_7
Type: TC
Location: 6222 - 8759 (+)
Gene ID: k141_133348_8
Type: pfam
Location: 9102 - 10100 (+)
Gene ID: k141_133348_9
Type: CAZyme
Location: 10406 - 11350 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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