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Cluster: CGMR088052_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_125334 k141_125334_1 77 2128 + 2.A.36.3.2
TC k141_125334 k141_125334_2 2431 3354 - 3.A.1.15.15
TC k141_125334 k141_125334_3 3351 4184 - 3.A.1.15.15
TC k141_125334 k141_125334_4 4211 4933 - 3.A.1.15.15
TF k141_125334 k141_125334_5 5054 5698 + Fe_dep_repress
pfam k141_125334 k141_125334_6 5824 6576 - Peptidase_M50B
CAZyme k141_125334 k141_125334_7 6817 7563 + GT26
TC k141_125334 k141_125334_8 7648 8442 - 3.A.1.104.2
Gene ID: k141_125334_1
Type: TC
Location: 77 - 2128 (+)
Gene ID: k141_125334_2
Type: TC
Location: 2431 - 3354 (-)
Gene ID: k141_125334_3
Type: TC
Location: 3351 - 4184 (-)
Gene ID: k141_125334_4
Type: TC
Location: 4211 - 4933 (-)
Gene ID: k141_125334_5
Type: TF
Location: 5054 - 5698 (+)
Gene ID: k141_125334_6
Type: pfam
Location: 5824 - 6576 (-)
Gene ID: k141_125334_7
Type: CAZyme
Location: 6817 - 7563 (+)
Gene ID: k141_125334_8
Type: TC
Location: 7648 - 8442 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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