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Cluster: CGMR088052_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_28851 k141_28851_5 2704 4089 + 1.A.26.1.3
STP k141_28851 k141_28851_6 4100 5938 + TrkA_C
pfam k141_28851 k141_28851_7 6192 6962 + adh_short | adh_short_C2
TC k141_28851 k141_28851_8 7141 8226 - 2.A.86.1.8
TC k141_28851 k141_28851_9 8555 10126 + 2.A.25.1.2
peptidase k141_28851 k141_28851_10 10226 10972 + S09.B07
pfam k141_28851 k141_28851_11 11058 11567 + LigT_PEase | 2_5_RNA_ligase2
TC k141_28851 k141_28851_12 11710 12903 - 2.A.1.2.44
CAZyme k141_28851 k141_28851_13 12881 13777 - GT28
Gene ID: k141_28851_5
Type: TC
Location: 2704 - 4089 (+)
Gene ID: k141_28851_6
Type: STP
Location: 4100 - 5938 (+)
Gene ID: k141_28851_7
Type: pfam
Location: 6192 - 6962 (+)
Gene ID: k141_28851_8
Type: TC
Location: 7141 - 8226 (-)
Gene ID: k141_28851_9
Type: TC
Location: 8555 - 10126 (+)
Gene ID: k141_28851_10
Type: peptidase
Location: 10226 - 10972 (+)
Gene ID: k141_28851_11
Type: pfam
Location: 11058 - 11567 (+)
Gene ID: k141_28851_12
Type: TC
Location: 11710 - 12903 (-)
Gene ID: k141_28851_13
Type: CAZyme
Location: 12881 - 13777 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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