Cluster: CGMR088042_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR088042
- CGC Family ID: CGCFAM_00055
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_421020 | k141_421020_2 | 629 | 1369 | - | 3.A.1.103.5 |
| pfam | k141_421020 | k141_421020_3 | 1369 | 2160 | - | ABC2_membrane |
| pfam | k141_421020 | k141_421020_4 | 2205 | 3707 | - | DUF6056 |
| CAZyme | k141_421020 | k141_421020_5 | 3694 | 6381 | - | GT2 |
| CAZyme | k141_421020 | k141_421020_6 | 6394 | 8538 | - | GT2 |
Gene ID: k141_421020_2
Type: TC
Location: 629 - 1369 (-)
Type: TC
Location: 629 - 1369 (-)
Gene ID: k141_421020_3
Type: pfam
Location: 1369 - 2160 (-)
Type: pfam
Location: 1369 - 2160 (-)
Gene ID: k141_421020_4
Type: pfam
Location: 2205 - 3707 (-)
Type: pfam
Location: 2205 - 3707 (-)
Gene ID: k141_421020_5
Type: CAZyme
Location: 3694 - 6381 (-)
Type: CAZyme
Location: 3694 - 6381 (-)
Gene ID: k141_421020_6
Type: CAZyme
Location: 6394 - 8538 (-)
Type: CAZyme
Location: 6394 - 8538 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.