Cluster: CGMR088042_CGC6
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR088042
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_384821 | k141_384821_2 | 290 | 1693 | + | 9.B.67.3.3 |
| CAZyme | k141_384821 | k141_384821_3 | 1704 | 2798 | + | GT4 |
| pfam | k141_384821 | k141_384821_4 | 2822 | 3775 | + | Acetyltransf_1 | Acetyltransf_9 |
| CAZyme | k141_384821 | k141_384821_5 | 3778 | 4563 | + | CE4 |
| CAZyme | k141_384821 | k141_384821_6 | 4560 | 5714 | + | GT4 |
| TC | k141_384821 | k141_384821_7 | 5707 | 6714 | + | 9.B.18.2.1 |
| pfam | k141_384821 | k141_384821_8 | 6692 | 7567 | + | Epimerase | RmlD_sub_bind |
| pfam | k141_384821 | k141_384821_9 | 7596 | 8711 | + | Epimerase_2 |
| CAZyme | k141_384821 | k141_384821_10 | 8713 | 9933 | + | GT4 |
Gene ID: k141_384821_2
Type: TC
Location: 290 - 1693 (+)
Type: TC
Location: 290 - 1693 (+)
Gene ID: k141_384821_3
Type: CAZyme
Location: 1704 - 2798 (+)
Type: CAZyme
Location: 1704 - 2798 (+)
Gene ID: k141_384821_4
Type: pfam
Location: 2822 - 3775 (+)
Type: pfam
Location: 2822 - 3775 (+)
Gene ID: k141_384821_5
Type: CAZyme
Location: 3778 - 4563 (+)
Type: CAZyme
Location: 3778 - 4563 (+)
Gene ID: k141_384821_6
Type: CAZyme
Location: 4560 - 5714 (+)
Type: CAZyme
Location: 4560 - 5714 (+)
Gene ID: k141_384821_7
Type: TC
Location: 5707 - 6714 (+)
Type: TC
Location: 5707 - 6714 (+)
Gene ID: k141_384821_8
Type: pfam
Location: 6692 - 7567 (+)
Type: pfam
Location: 6692 - 7567 (+)
Gene ID: k141_384821_9
Type: pfam
Location: 7596 - 8711 (+)
Type: pfam
Location: 7596 - 8711 (+)
Gene ID: k141_384821_10
Type: CAZyme
Location: 8713 - 9933 (+)
Type: CAZyme
Location: 8713 - 9933 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.