Cluster: CGMR088042_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR088042
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_54720 | k141_54720_1 | 188 | 955 | - | GT2 |
| pfam | k141_54720 | k141_54720_2 | 952 | 1914 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| NULL(UNKNOWN) | k141_54720 | k141_54720_3 | 1914 | 2471 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_54720 | k141_54720_4 | 2485 | 3621 | - | GT4 |
| TC | k141_54720 | k141_54720_5 | 3720 | 5054 | - | 9.B.67.3.6 |
Gene ID: k141_54720_1
Type: CAZyme
Location: 188 - 955 (-)
Type: CAZyme
Location: 188 - 955 (-)
Gene ID: k141_54720_2
Type: pfam
Location: 952 - 1914 (-)
Type: pfam
Location: 952 - 1914 (-)
Gene ID: k141_54720_3
Type:
Location: 1914 - 2471 (-)
Type:
Location: 1914 - 2471 (-)
Gene ID: k141_54720_4
Type: CAZyme
Location: 2485 - 3621 (-)
Type: CAZyme
Location: 2485 - 3621 (-)
Gene ID: k141_54720_5
Type: TC
Location: 3720 - 5054 (-)
Type: TC
Location: 3720 - 5054 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.