Cluster: CGMR088042_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR088042
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_5730 | k141_5730_2 | 924 | 2108 | - | GT4 |
| pfam | k141_5730 | k141_5730_3 | 2120 | 3451 | - | PS_pyruv_trans |
| CAZyme | k141_5730 | k141_5730_4 | 3479 | 4642 | - | GT4 |
| pfam | k141_5730 | k141_5730_5 | 4680 | 6107 | - | Polysacc_synt | Polysacc_synt_3 |
| pfam | k141_5730 | k141_5730_6 | 6079 | 7026 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 |
| TC | k141_5730 | k141_5730_7 | 6992 | 7600 | - | 9.B.18.1.3 |
| CAZyme | k141_5730 | k141_5730_8 | 7679 | 8392 | - | GH25 |
Gene ID: k141_5730_2
Type: CAZyme
Location: 924 - 2108 (-)
Type: CAZyme
Location: 924 - 2108 (-)
Gene ID: k141_5730_3
Type: pfam
Location: 2120 - 3451 (-)
Type: pfam
Location: 2120 - 3451 (-)
Gene ID: k141_5730_4
Type: CAZyme
Location: 3479 - 4642 (-)
Type: CAZyme
Location: 3479 - 4642 (-)
Gene ID: k141_5730_5
Type: pfam
Location: 4680 - 6107 (-)
Type: pfam
Location: 4680 - 6107 (-)
Gene ID: k141_5730_6
Type: pfam
Location: 6079 - 7026 (-)
Type: pfam
Location: 6079 - 7026 (-)
Gene ID: k141_5730_7
Type: TC
Location: 6992 - 7600 (-)
Type: TC
Location: 6992 - 7600 (-)
Gene ID: k141_5730_8
Type: CAZyme
Location: 7679 - 8392 (-)
Type: CAZyme
Location: 7679 - 8392 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.