Cluster: CGMR088042_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR088042
- CGC Family ID: CGCFAM_00074
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_436692 | k141_436692_1 | 3 | 377 | + | GT4 |
| CAZyme | k141_436692 | k141_436692_2 | 370 | 1302 | + | GT2 |
| CAZyme | k141_436692 | k141_436692_3 | 1479 | 2405 | + | GT4 |
| CAZyme | k141_436692 | k141_436692_4 | 2395 | 3321 | + | GT2 |
| pfam | k141_436692 | k141_436692_5 | 3371 | 4162 | + | ABC2_membrane |
| TC | k141_436692 | k141_436692_6 | 4173 | 4916 | + | 3.A.1.103.1 |
| CAZyme | k141_436692 | k141_436692_7 | 4926 | 5957 | + | GT2 |
| CAZyme | k141_436692 | k141_436692_8 | 5968 | 7236 | + | GT4 |
Gene ID: k141_436692_1
Type: CAZyme
Location: 3 - 377 (+)
Type: CAZyme
Location: 3 - 377 (+)
Gene ID: k141_436692_2
Type: CAZyme
Location: 370 - 1302 (+)
Type: CAZyme
Location: 370 - 1302 (+)
Gene ID: k141_436692_3
Type: CAZyme
Location: 1479 - 2405 (+)
Type: CAZyme
Location: 1479 - 2405 (+)
Gene ID: k141_436692_4
Type: CAZyme
Location: 2395 - 3321 (+)
Type: CAZyme
Location: 2395 - 3321 (+)
Gene ID: k141_436692_5
Type: pfam
Location: 3371 - 4162 (+)
Type: pfam
Location: 3371 - 4162 (+)
Gene ID: k141_436692_6
Type: TC
Location: 4173 - 4916 (+)
Type: TC
Location: 4173 - 4916 (+)
Gene ID: k141_436692_7
Type: CAZyme
Location: 4926 - 5957 (+)
Type: CAZyme
Location: 4926 - 5957 (+)
Gene ID: k141_436692_8
Type: CAZyme
Location: 5968 - 7236 (+)
Type: CAZyme
Location: 5968 - 7236 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.