Cluster: CGMR087777_CGC41
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR087777
- CGC Family ID: CGCFAM_09086
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_256291 | k141_256291_10 | 12230 | 12958 | - | GT2 |
| CAZyme | k141_256291 | k141_256291_11 | 13136 | 13843 | - | GT2 |
| pfam | k141_256291 | k141_256291_12 | 13836 | 15071 | - | Glyco_trans_1_2 | Glyco_trans_1_4 |
| CAZyme | k141_256291 | k141_256291_13 | 15111 | 16028 | - | GT14 |
| pfam | k141_256291 | k141_256291_14 | 16061 | 17215 | - | EpsG |
| pfam | k141_256291 | k141_256291_15 | 17242 | 18462 | - | Wzz |
| CAZyme | k141_256291 | k141_256291_16 | 18573 | 19337 | - | GT32 |
| TC | k141_256291 | k141_256291_17 | 19327 | 20781 | - | 2.A.66.2.16 |
| CAZyme | k141_256291 | k141_256291_18 | 20819 | 22087 | - | GT2 |
| CAZyme | k141_256291 | k141_256291_19 | 22095 | 23852 | - | GH163 |
| pfam | k141_256291 | k141_256291_20 | 23919 | 26552 | - | Poly_export | SLBB | SLBB | SLBB | SLBB | SLBB | SLBB_2 | SLBB_2 |
| TC | k141_256291 | k141_256291_21 | 26784 | 27431 | - | 9.B.18.1.3 |
Gene ID: k141_256291_10
Type: CAZyme
Location: 12230 - 12958 (-)
Type: CAZyme
Location: 12230 - 12958 (-)
Gene ID: k141_256291_11
Type: CAZyme
Location: 13136 - 13843 (-)
Type: CAZyme
Location: 13136 - 13843 (-)
Gene ID: k141_256291_12
Type: pfam
Location: 13836 - 15071 (-)
Type: pfam
Location: 13836 - 15071 (-)
Gene ID: k141_256291_13
Type: CAZyme
Location: 15111 - 16028 (-)
Type: CAZyme
Location: 15111 - 16028 (-)
Gene ID: k141_256291_14
Type: pfam
Location: 16061 - 17215 (-)
Type: pfam
Location: 16061 - 17215 (-)
Gene ID: k141_256291_15
Type: pfam
Location: 17242 - 18462 (-)
Type: pfam
Location: 17242 - 18462 (-)
Gene ID: k141_256291_16
Type: CAZyme
Location: 18573 - 19337 (-)
Type: CAZyme
Location: 18573 - 19337 (-)
Gene ID: k141_256291_17
Type: TC
Location: 19327 - 20781 (-)
Type: TC
Location: 19327 - 20781 (-)
Gene ID: k141_256291_18
Type: CAZyme
Location: 20819 - 22087 (-)
Type: CAZyme
Location: 20819 - 22087 (-)
Gene ID: k141_256291_19
Type: CAZyme
Location: 22095 - 23852 (-)
Type: CAZyme
Location: 22095 - 23852 (-)
Gene ID: k141_256291_20
Type: pfam
Location: 23919 - 26552 (-)
Type: pfam
Location: 23919 - 26552 (-)
Gene ID: k141_256291_21
Type: TC
Location: 26784 - 27431 (-)
Type: TC
Location: 26784 - 27431 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.