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Cluster: CGMR087777_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_123602 k141_123602_12 11681 13372 + 3.A.1.117.1
pfam k141_123602 k141_123602_13 13379 14305 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8
CAZyme k141_123602 k141_123602_14 14686 15933 - GH53
CAZyme k141_123602 k141_123602_15 15960 17951 - GH13_6
pfam k141_123602 k141_123602_16 18111 18992 - EamA | EamA
pfam k141_123602 k141_123602_17 18989 20020 - Endonuclease_NS
TC k141_123602 k141_123602_18 20064 20639 - 2.A.51.1.6
TC k141_123602 k141_123602_19 20643 21191 - 2.A.51.1.6
Gene ID: k141_123602_12
Type: TC
Location: 11681 - 13372 (+)
Gene ID: k141_123602_13
Type: pfam
Location: 13379 - 14305 (+)
Gene ID: k141_123602_14
Type: CAZyme
Location: 14686 - 15933 (-)
Gene ID: k141_123602_15
Type: CAZyme
Location: 15960 - 17951 (-)
Gene ID: k141_123602_16
Type: pfam
Location: 18111 - 18992 (-)
Gene ID: k141_123602_17
Type: pfam
Location: 18989 - 20020 (-)
Gene ID: k141_123602_18
Type: TC
Location: 20064 - 20639 (-)
Gene ID: k141_123602_19
Type: TC
Location: 20643 - 21191 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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