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Cluster: CGMR087777_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_171446 k141_171446_8 11420 12892 + 9.A.25.1.1
pfam k141_171446 k141_171446_9 12895 13794 + GldL_N
TC k141_171446 k141_171446_10 13849 15357 + 9.A.25.1.1
pfam k141_171446 k141_171446_11 15402 16445 + GldN
pfam k141_171446 k141_171446_12 16519 17136 + OMP_b-brl | OMP_b-brl_2
TC k141_171446 k141_171446_13 17291 19135 + 3.A.16.1.2
pfam k141_171446 k141_171446_14 19298 22351 - Cleaved_Adhesin | CARDB
pfam k141_171446 k141_171446_15 22704 23633 - Patatin
CAZyme k141_171446 k141_171446_16 23705 25084 - GH28
TC k141_171446 k141_171446_17 25111 27408 - 3.A.11.3.1
TF k141_171446 k141_171446_18 27934 31050 + HTH_AraC
CAZyme k141_171446 k141_171446_19 31034 33808 - CBM6 | GH3
Gene ID: k141_171446_8
Type: TC
Location: 11420 - 12892 (+)
Gene ID: k141_171446_9
Type: pfam
Location: 12895 - 13794 (+)
Gene ID: k141_171446_10
Type: TC
Location: 13849 - 15357 (+)
Gene ID: k141_171446_11
Type: pfam
Location: 15402 - 16445 (+)
Gene ID: k141_171446_12
Type: pfam
Location: 16519 - 17136 (+)
Gene ID: k141_171446_13
Type: TC
Location: 17291 - 19135 (+)
Gene ID: k141_171446_14
Type: pfam
Location: 19298 - 22351 (-)
Gene ID: k141_171446_15
Type: pfam
Location: 22704 - 23633 (-)
Gene ID: k141_171446_16
Type: CAZyme
Location: 23705 - 25084 (-)
Gene ID: k141_171446_17
Type: TC
Location: 25111 - 27408 (-)
Gene ID: k141_171446_18
Type: TF
Location: 27934 - 31050 (+)
Gene ID: k141_171446_19
Type: CAZyme
Location: 31034 - 33808 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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