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Cluster: CGMR087777_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_202023 k141_202023_17 12462 13475 + GH43_18
pfam k141_202023 k141_202023_18 13573 13893 + rhaM
CAZyme k141_202023 k141_202023_19 14015 15679 + CE12 | CE12
STP k141_202023 k141_202023_20 16140 17573 - HD
CAZyme k141_202023 k141_202023_21 17916 20459 + GH106
CAZyme k141_202023 k141_202023_22 20456 21565 + GH105
TC k141_202023 k141_202023_23 21774 24335 + 9.A.8.1.6
NULL(UNKNOWN) k141_202023 k141_202023_24 24380 25468 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_202023 k141_202023_25 25580 27643 - GH13_8
Gene ID: k141_202023_17
Type: CAZyme
Location: 12462 - 13475 (+)
Gene ID: k141_202023_18
Type: pfam
Location: 13573 - 13893 (+)
Gene ID: k141_202023_19
Type: CAZyme
Location: 14015 - 15679 (+)
Gene ID: k141_202023_20
Type: STP
Location: 16140 - 17573 (-)
Gene ID: k141_202023_21
Type: CAZyme
Location: 17916 - 20459 (+)
Gene ID: k141_202023_22
Type: CAZyme
Location: 20456 - 21565 (+)
Gene ID: k141_202023_23
Type: TC
Location: 21774 - 24335 (+)
Gene ID: k141_202023_24
Type:
Location: 24380 - 25468 (-)
Gene ID: k141_202023_25
Type: CAZyme
Location: 25580 - 27643 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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