Cluster: CGMR087777_CGC16
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR087777
- CGC Family ID: CGCFAM_00349
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_140115 | k141_140115_4 | 597 | 1661 | - | GT9 |
| pfam | k141_140115 | k141_140115_5 | 1672 | 2283 | - | DUF4254 |
| NULL(UNKNOWN) | k141_140115 | k141_140115_6 | 2327 | 2512 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_140115 | k141_140115_7 | 2584 | 2820 | + | 3.D.1.6.3 |
| pfam | k141_140115 | k141_140115_8 | 2872 | 4134 | + | ketoacyl-synt | Ketoacyl-synt_C |
| pfam | k141_140115 | k141_140115_9 | 4124 | 5188 | + | dsrm | Ribonuclease_3 | Ribonucleas_3_3 | RM44_endonuclase |
| TC | k141_140115 | k141_140115_10 | 5440 | 6909 | + | 3.A.1.3.15 |
| TC | k141_140115 | k141_140115_11 | 6893 | 7684 | + | 3.A.1.3.15 |
Gene ID: k141_140115_4
Type: CAZyme
Location: 597 - 1661 (-)
Type: CAZyme
Location: 597 - 1661 (-)
Gene ID: k141_140115_5
Type: pfam
Location: 1672 - 2283 (-)
Type: pfam
Location: 1672 - 2283 (-)
Gene ID: k141_140115_6
Type:
Location: 2327 - 2512 (+)
Type:
Location: 2327 - 2512 (+)
Gene ID: k141_140115_7
Type: TC
Location: 2584 - 2820 (+)
Type: TC
Location: 2584 - 2820 (+)
Gene ID: k141_140115_8
Type: pfam
Location: 2872 - 4134 (+)
Type: pfam
Location: 2872 - 4134 (+)
Gene ID: k141_140115_9
Type: pfam
Location: 4124 - 5188 (+)
Type: pfam
Location: 4124 - 5188 (+)
Gene ID: k141_140115_10
Type: TC
Location: 5440 - 6909 (+)
Type: TC
Location: 5440 - 6909 (+)
Gene ID: k141_140115_11
Type: TC
Location: 6893 - 7684 (+)
Type: TC
Location: 6893 - 7684 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.