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Cluster: CGMR087367_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_37956 k141_37956_9 9321 9863 + 2.A.107.1.2
pfam k141_37956 k141_37956_10 10376 11395 - NMT1 | NMT1_2
TC k141_37956 k141_37956_11 11430 12251 - 3.A.1.17.3
TC k141_37956 k141_37956_12 12238 12996 - 3.A.1.17.8
pfam k141_37956 k141_37956_13 13130 13399 + DUF1905
CAZyme k141_37956 k141_37956_14 13747 15663 + CBM48 | GH13_9
pfam k141_37956 k141_37956_15 15693 17075 + NTP_transferase | Hexapep_GlmU
pfam k141_37956 k141_37956_16 17072 18196 + NTP_transferase | Hexapep_GlmU
CAZyme k141_37956 k141_37956_17 18228 19643 + GT5
TC k141_37956 k141_37956_18 20086 21417 - 2.A.66.1.37
Gene ID: k141_37956_9
Type: TC
Location: 9321 - 9863 (+)
Gene ID: k141_37956_10
Type: pfam
Location: 10376 - 11395 (-)
Gene ID: k141_37956_11
Type: TC
Location: 11430 - 12251 (-)
Gene ID: k141_37956_12
Type: TC
Location: 12238 - 12996 (-)
Gene ID: k141_37956_13
Type: pfam
Location: 13130 - 13399 (+)
Gene ID: k141_37956_14
Type: CAZyme
Location: 13747 - 15663 (+)
Gene ID: k141_37956_15
Type: pfam
Location: 15693 - 17075 (+)
Gene ID: k141_37956_16
Type: pfam
Location: 17072 - 18196 (+)
Gene ID: k141_37956_17
Type: CAZyme
Location: 18228 - 19643 (+)
Gene ID: k141_37956_18
Type: TC
Location: 20086 - 21417 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_37956_13 vegetarian > vegan 1.70725 0.01882

🧭 Explore Read Mapping of CGC

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