Cluster: CGMR087367_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR087367
- CGC Family ID: CGCFAM_00917
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_161093 | k141_161093_1 | 13 | 1473 | - | 2.A.35.1.1 |
| pfam | k141_161093 | k141_161093_2 | 1490 | 2059 | - | ATC_hydrolase |
| CAZyme | k141_161093 | k141_161093_3 | 2688 | 3677 | - | GH25 |
| pfam | k141_161093 | k141_161093_4 | 3774 | 7379 | - | UvrD-helicase | PDDEXK_1 | AAA_19 | AAA_19 | UvrD_C |
| pfam | k141_161093 | k141_161093_5 | 7376 | 10678 | - | PDDEXK_1 | ADDB_N |
| TC | k141_161093 | k141_161093_6 | 10876 | 12693 | - | 3.A.16.1.2 |
| CAZyme | k141_161093 | k141_161093_7 | 12719 | 13525 | - | GT2 |
Gene ID: k141_161093_1
Type: TC
Location: 13 - 1473 (-)
Type: TC
Location: 13 - 1473 (-)
Gene ID: k141_161093_2
Type: pfam
Location: 1490 - 2059 (-)
Type: pfam
Location: 1490 - 2059 (-)
Gene ID: k141_161093_3
Type: CAZyme
Location: 2688 - 3677 (-)
Type: CAZyme
Location: 2688 - 3677 (-)
Gene ID: k141_161093_4
Type: pfam
Location: 3774 - 7379 (-)
Type: pfam
Location: 3774 - 7379 (-)
Gene ID: k141_161093_5
Type: pfam
Location: 7376 - 10678 (-)
Type: pfam
Location: 7376 - 10678 (-)
Gene ID: k141_161093_6
Type: TC
Location: 10876 - 12693 (-)
Type: TC
Location: 10876 - 12693 (-)
Gene ID: k141_161093_7
Type: CAZyme
Location: 12719 - 13525 (-)
Type: CAZyme
Location: 12719 - 13525 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fimivivens
Species
Fimivivens sp900113995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_161093_2 | vegetarian > vegan | 1.27812 | 0.01882 |
| k141_161093_3 | vegetarian > vegan | 1.15953 | 0.01882 |