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Cluster: CGMR086776_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_15536 k141_15536_2 1896 3596 + 1.B.17.3.8
TC k141_15536 k141_15536_3 3618 4658 + 3.A.1.105.4
TC k141_15536 k141_15536_4 4668 6467 + 3.A.1.105.4
TC k141_15536 k141_15536_5 6464 7576 + 3.A.1.105.4
TC k141_15536 k141_15536_6 7576 8691 + 3.A.1.105.4
pfam k141_15536 k141_15536_7 9837 13133 + DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
TC k141_15536 k141_15536_8 13130 14737 + 2.A.66.2.14
pfam k141_15536 k141_15536_9 14721 15491 + MazG | MazG
pfam k141_15536 k141_15536_10 15543 15842 + Bac_DNA_binding | HU-HIG
CAZyme k141_15536 k141_15536_11 15925 17079 + GT28
NULL(UNKNOWN) k141_15536 k141_15536_12 17122 17442 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_15536 k141_15536_13 17555 19567 + 3.A.1.120.6
STP k141_15536 k141_15536_14 19700 21169 + Fer4
pfam k141_15536 k141_15536_15 21444 22073 + PhoU_div
TC k141_15536 k141_15536_16 22066 23064 + 2.A.20.1.5
NULL(UNKNOWN) k141_15536 k141_15536_17 23495 23668 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_15536 k141_15536_18 23900 24904 - Peripla_BP_2
TC k141_15536 k141_15536_19 24926 25672 - 3.A.1.14.8
TC k141_15536 k141_15536_20 25699 26706 - 3.A.1.14.1
TC k141_15536 k141_15536_21 26952 27407 + 4.A.7.1.1
TC k141_15536 k141_15536_22 27429 27704 + 4.A.7.1.2
TC k141_15536 k141_15536_23 27736 29103 + 4.A.7.1.4
pfam k141_15536 k141_15536_24 29103 29498 + DUF454
TF k141_15536 k141_15536_25 29798 30646 + HTH_AraC
TC k141_15536 k141_15536_26 30878 35899 + 1.B.14.1.4
TC k141_15536 k141_15536_27 36086 41158 + 1.B.14.1.4
TC k141_15536 k141_15536_28 41194 41811 + 1.A.30.2.9
Gene ID: k141_15536_2
Type: TC
Location: 1896 - 3596 (+)
Gene ID: k141_15536_3
Type: TC
Location: 3618 - 4658 (+)
Gene ID: k141_15536_4
Type: TC
Location: 4668 - 6467 (+)
Gene ID: k141_15536_5
Type: TC
Location: 6464 - 7576 (+)
Gene ID: k141_15536_6
Type: TC
Location: 7576 - 8691 (+)
Gene ID: k141_15536_7
Type: pfam
Location: 9837 - 13133 (+)
Gene ID: k141_15536_8
Type: TC
Location: 13130 - 14737 (+)
Gene ID: k141_15536_9
Type: pfam
Location: 14721 - 15491 (+)
Gene ID: k141_15536_10
Type: pfam
Location: 15543 - 15842 (+)
Gene ID: k141_15536_11
Type: CAZyme
Location: 15925 - 17079 (+)
Gene ID: k141_15536_12
Type:
Location: 17122 - 17442 (-)
Gene ID: k141_15536_13
Type: TC
Location: 17555 - 19567 (+)
Gene ID: k141_15536_14
Type: STP
Location: 19700 - 21169 (+)
Gene ID: k141_15536_15
Type: pfam
Location: 21444 - 22073 (+)
Gene ID: k141_15536_16
Type: TC
Location: 22066 - 23064 (+)
Gene ID: k141_15536_17
Type:
Location: 23495 - 23668 (+)
Gene ID: k141_15536_18
Type: STP
Location: 23900 - 24904 (-)
Gene ID: k141_15536_19
Type: TC
Location: 24926 - 25672 (-)
Gene ID: k141_15536_20
Type: TC
Location: 25699 - 26706 (-)
Gene ID: k141_15536_21
Type: TC
Location: 26952 - 27407 (+)
Gene ID: k141_15536_22
Type: TC
Location: 27429 - 27704 (+)
Gene ID: k141_15536_23
Type: TC
Location: 27736 - 29103 (+)
Gene ID: k141_15536_24
Type: pfam
Location: 29103 - 29498 (+)
Gene ID: k141_15536_25
Type: TF
Location: 29798 - 30646 (+)
Gene ID: k141_15536_26
Type: TC
Location: 30878 - 35899 (+)
Gene ID: k141_15536_27
Type: TC
Location: 36086 - 41158 (+)
Gene ID: k141_15536_28
Type: TC
Location: 41194 - 41811 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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