Cluster: CGMR086651_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR086651
- CGC Family ID: CGCFAM_01659
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_28617 | k141_28617_20 | 19920 | 20417 | - | 4.A.5.1.6 |
| pfam | k141_28617 | k141_28617_21 | 20533 | 21009 | + | Nuc_deoxyrib_tr |
| CAZyme | k141_28617 | k141_28617_22 | 21492 | 24509 | + | GH31_18 |
| NULL(UNKNOWN) | k141_28617 | k141_28617_23 | 24543 | 24758 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | k141_28617 | k141_28617_24 | 24833 | 25654 | - | S09.UPW |
| TC | k141_28617 | k141_28617_25 | 25626 | 26411 | - | 9.B.141.1.2 |
| TC | k141_28617 | k141_28617_26 | 26408 | 27541 | - | 9.B.141.1.3 |
Gene ID: k141_28617_20
Type: TC
Location: 19920 - 20417 (-)
Type: TC
Location: 19920 - 20417 (-)
Gene ID: k141_28617_21
Type: pfam
Location: 20533 - 21009 (+)
Type: pfam
Location: 20533 - 21009 (+)
Gene ID: k141_28617_22
Type: CAZyme
Location: 21492 - 24509 (+)
Type: CAZyme
Location: 21492 - 24509 (+)
Gene ID: k141_28617_23
Type:
Location: 24543 - 24758 (-)
Type:
Location: 24543 - 24758 (-)
Gene ID: k141_28617_24
Type: peptidase
Location: 24833 - 25654 (-)
Type: peptidase
Location: 24833 - 25654 (-)
Gene ID: k141_28617_25
Type: TC
Location: 25626 - 26411 (-)
Type: TC
Location: 25626 - 26411 (-)
Gene ID: k141_28617_26
Type: TC
Location: 26408 - 27541 (-)
Type: TC
Location: 26408 - 27541 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus helveticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.