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Cluster: CGMR086440_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_114811 k141_114811_7 7490 8173 + CE12
pfam k141_114811 k141_114811_8 8175 9011 + AP_endonuc_2
TC k141_114811 k141_114811_9 9022 10776 + 3.A.1.106.2
pfam k141_114811 k141_114811_10 11053 11394 - Com_YlbF
CAZyme k141_114811 k141_114811_11 11462 13633 - GT51
pfam k141_114811 k141_114811_12 13844 14701 + PseudoU_synth_2
pfam k141_114811 k141_114811_13 14772 15629 - ROK
CAZyme k141_114811 k141_114811_14 15614 18316 - GH38
CAZyme k141_114811 k141_114811_15 18329 19618 - GH125
TF k141_114811 k141_114811_16 19768 20814 + GntR
CAZyme k141_114811 k141_114811_17 20816 22969 + GH92
Gene ID: k141_114811_7
Type: CAZyme
Location: 7490 - 8173 (+)
Gene ID: k141_114811_8
Type: pfam
Location: 8175 - 9011 (+)
Gene ID: k141_114811_9
Type: TC
Location: 9022 - 10776 (+)
Gene ID: k141_114811_10
Type: pfam
Location: 11053 - 11394 (-)
Gene ID: k141_114811_11
Type: CAZyme
Location: 11462 - 13633 (-)
Gene ID: k141_114811_12
Type: pfam
Location: 13844 - 14701 (+)
Gene ID: k141_114811_13
Type: pfam
Location: 14772 - 15629 (-)
Gene ID: k141_114811_14
Type: CAZyme
Location: 15614 - 18316 (-)
Gene ID: k141_114811_15
Type: CAZyme
Location: 18329 - 19618 (-)
Gene ID: k141_114811_16
Type: TF
Location: 19768 - 20814 (+)
Gene ID: k141_114811_17
Type: CAZyme
Location: 20816 - 22969 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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