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Cluster: CGMR086440_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_274149 k141_274149_12 11570 12760 - GH43_4
pfam k141_274149 k141_274149_13 12813 13058 - DUF6171
CAZyme k141_274149 k141_274149_14 13084 14529 - GH51_1
CAZyme k141_274149 k141_274149_15 14540 16162 - GH43_4
CAZyme k141_274149 k141_274149_16 16181 17137 - GH43_26
NULL(UNKNOWN) k141_274149 k141_274149_17 17153 17569 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_274149 k141_274149_18 17578 18429 - 3.A.1.1.20
TC k141_274149 k141_274149_19 18441 19331 - 3.A.1.1.20
STP k141_274149 k141_274149_20 19376 20626 - SBP_bac_1
TF k141_274149 k141_274149_21 20940 21830 + HTH_5
TC k141_274149 k141_274149_22 21972 23795 - 2.A.3.14.3
TC k141_274149 k141_274149_23 24392 27097 - 9.B.74.1.1
Gene ID: k141_274149_12
Type: CAZyme
Location: 11570 - 12760 (-)
Gene ID: k141_274149_13
Type: pfam
Location: 12813 - 13058 (-)
Gene ID: k141_274149_14
Type: CAZyme
Location: 13084 - 14529 (-)
Gene ID: k141_274149_15
Type: CAZyme
Location: 14540 - 16162 (-)
Gene ID: k141_274149_16
Type: CAZyme
Location: 16181 - 17137 (-)
Gene ID: k141_274149_17
Type:
Location: 17153 - 17569 (-)
Gene ID: k141_274149_18
Type: TC
Location: 17578 - 18429 (-)
Gene ID: k141_274149_19
Type: TC
Location: 18441 - 19331 (-)
Gene ID: k141_274149_20
Type: STP
Location: 19376 - 20626 (-)
Gene ID: k141_274149_21
Type: TF
Location: 20940 - 21830 (+)
Gene ID: k141_274149_22
Type: TC
Location: 21972 - 23795 (-)
Gene ID: k141_274149_23
Type: TC
Location: 24392 - 27097 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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