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Cluster: CGMR086440_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_147778 k141_147778_6 6237 7739 + 3.A.1.121.3
pfam k141_147778 k141_147778_7 7806 8333 + His_Phos_1
CAZyme k141_147778 k141_147778_8 8544 9605 + GH170
STP k141_147778 k141_147778_9 9608 10504 + SIS
TC k141_147778 k141_147778_10 10518 12500 + 4.A.1.2.11
pfam k141_147778 k141_147778_11 12565 13011 - Flavodoxin_NdrI
TC k141_147778 k141_147778_12 13222 14646 + 2.A.3.2.11
pfam k141_147778 k141_147778_13 14827 15600 - ABC2_membrane_2 | ABC2_membrane_4
TC k141_147778 k141_147778_14 15597 16502 - 3.A.1.124.3
TC k141_147778 k141_147778_15 16656 16976 - 2.A.7.1.4
Gene ID: k141_147778_6
Type: TC
Location: 6237 - 7739 (+)
Gene ID: k141_147778_7
Type: pfam
Location: 7806 - 8333 (+)
Gene ID: k141_147778_8
Type: CAZyme
Location: 8544 - 9605 (+)
Gene ID: k141_147778_9
Type: STP
Location: 9608 - 10504 (+)
Gene ID: k141_147778_10
Type: TC
Location: 10518 - 12500 (+)
Gene ID: k141_147778_11
Type: pfam
Location: 12565 - 13011 (-)
Gene ID: k141_147778_12
Type: TC
Location: 13222 - 14646 (+)
Gene ID: k141_147778_13
Type: pfam
Location: 14827 - 15600 (-)
Gene ID: k141_147778_14
Type: TC
Location: 15597 - 16502 (-)
Gene ID: k141_147778_15
Type: TC
Location: 16656 - 16976 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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