Cluster: CGMR086440_CGC17
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR086440
- CGC Family ID: CGCFAM_01959
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_112642 | k141_112642_36 | 33129 | 35474 | - | GT51 |
| pfam | k141_112642 | k141_112642_37 | 35753 | 36655 | + | AP_endonuc_2 |
| NULL(UNKNOWN) | k141_112642 | k141_112642_38 | 36868 | 38643 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_112642 | k141_112642_39 | 38709 | 40295 | - | 2.A.55.2.6 |
| pfam | k141_112642 | k141_112642_40 | 40546 | 40770 | + | UPF0154 |
| TC | k141_112642 | k141_112642_41 | 40912 | 42663 | + | 3.A.1.106.8 |
| TC | k141_112642 | k141_112642_42 | 42663 | 44447 | + | 3.A.1.106.8 |
| pfam | k141_112642 | k141_112642_43 | 44905 | 45651 | + | PRD | PRD | CAT_RBD |
| TC | k141_112642 | k141_112642_44 | 45852 | 47258 | + | 4.A.1.2.6 |
| TC | k141_112642 | k141_112642_45 | 47383 | 47739 | + | 4.A.1.2.11 |
| TF | k141_112642 | k141_112642_46 | 47780 | 48682 | - | HTH_6 |
| CAZyme | k141_112642 | k141_112642_47 | 48912 | 50315 | + | GH4 |
| CAZyme | k141_112642 | k141_112642_48 | 50315 | 51748 | + | GH1 |
Gene ID: k141_112642_36
Type: CAZyme
Location: 33129 - 35474 (-)
Type: CAZyme
Location: 33129 - 35474 (-)
Gene ID: k141_112642_37
Type: pfam
Location: 35753 - 36655 (+)
Type: pfam
Location: 35753 - 36655 (+)
Gene ID: k141_112642_38
Type:
Location: 36868 - 38643 (+)
Type:
Location: 36868 - 38643 (+)
Gene ID: k141_112642_39
Type: TC
Location: 38709 - 40295 (-)
Type: TC
Location: 38709 - 40295 (-)
Gene ID: k141_112642_40
Type: pfam
Location: 40546 - 40770 (+)
Type: pfam
Location: 40546 - 40770 (+)
Gene ID: k141_112642_41
Type: TC
Location: 40912 - 42663 (+)
Type: TC
Location: 40912 - 42663 (+)
Gene ID: k141_112642_42
Type: TC
Location: 42663 - 44447 (+)
Type: TC
Location: 42663 - 44447 (+)
Gene ID: k141_112642_43
Type: pfam
Location: 44905 - 45651 (+)
Type: pfam
Location: 44905 - 45651 (+)
Gene ID: k141_112642_44
Type: TC
Location: 45852 - 47258 (+)
Type: TC
Location: 45852 - 47258 (+)
Gene ID: k141_112642_45
Type: TC
Location: 47383 - 47739 (+)
Type: TC
Location: 47383 - 47739 (+)
Gene ID: k141_112642_46
Type: TF
Location: 47780 - 48682 (-)
Type: TF
Location: 47780 - 48682 (-)
Gene ID: k141_112642_47
Type: CAZyme
Location: 48912 - 50315 (+)
Type: CAZyme
Location: 48912 - 50315 (+)
Gene ID: k141_112642_48
Type: CAZyme
Location: 50315 - 51748 (+)
Type: CAZyme
Location: 50315 - 51748 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_B
Species
Enterococcus_B faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.