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Cluster: CGMR086440_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_88816 k141_88816_16 17126 18526 + 2.A.1.1.116
TF k141_88816 k141_88816_17 18776 19855 - GntR
CAZyme k141_88816 k141_88816_18 19941 20900 - GH43_26
CAZyme k141_88816 k141_88816_19 20912 22423 - GH51_1
pfam k141_88816 k141_88816_20 22445 23008 - DUF624
TC k141_88816 k141_88816_21 23014 23877 - 3.A.1.1.34
TC k141_88816 k141_88816_22 23891 24787 - 3.A.1.1.36
STP k141_88816 k141_88816_23 24962 26233 - SBP_bac_1
CAZyme k141_88816 k141_88816_24 26223 27740 - GH51_1
Gene ID: k141_88816_16
Type: TC
Location: 17126 - 18526 (+)
Gene ID: k141_88816_17
Type: TF
Location: 18776 - 19855 (-)
Gene ID: k141_88816_18
Type: CAZyme
Location: 19941 - 20900 (-)
Gene ID: k141_88816_19
Type: CAZyme
Location: 20912 - 22423 (-)
Gene ID: k141_88816_20
Type: pfam
Location: 22445 - 23008 (-)
Gene ID: k141_88816_21
Type: TC
Location: 23014 - 23877 (-)
Gene ID: k141_88816_22
Type: TC
Location: 23891 - 24787 (-)
Gene ID: k141_88816_23
Type: STP
Location: 24962 - 26233 (-)
Gene ID: k141_88816_24
Type: CAZyme
Location: 26223 - 27740 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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