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Cluster: CGMR086362_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_218838 k141_218838_6 3325 6189 - GH2
TC k141_218838 k141_218838_7 6220 7053 - 3.A.1.1.18
TC k141_218838 k141_218838_8 7056 7949 - 3.A.1.1.11
STP k141_218838 k141_218838_9 8090 9481 - SBP_bac_1
TF k141_218838 k141_218838_10 9629 11128 - HTH_AraC | HTH_AraC
TC k141_218838 k141_218838_11 11173 12966 - 8.A.59.2.1
pfam k141_218838 k141_218838_12 13256 14815 + MatE | Polysacc_synt
TF k141_218838 k141_218838_13 14868 15593 - GntR
TC k141_218838 k141_218838_14 15678 16364 - 4.B.1.1.2
STP k141_218838 k141_218838_15 16391 17323 - PfkB
pfam k141_218838 k141_218838_16 17320 18315 - ADP_ribosyl_GH
TC k141_218838 k141_218838_17 18644 20023 + 2.A.66.1.28
Gene ID: k141_218838_6
Type: CAZyme
Location: 3325 - 6189 (-)
Gene ID: k141_218838_7
Type: TC
Location: 6220 - 7053 (-)
Gene ID: k141_218838_8
Type: TC
Location: 7056 - 7949 (-)
Gene ID: k141_218838_9
Type: STP
Location: 8090 - 9481 (-)
Gene ID: k141_218838_10
Type: TF
Location: 9629 - 11128 (-)
Gene ID: k141_218838_11
Type: TC
Location: 11173 - 12966 (-)
Gene ID: k141_218838_12
Type: pfam
Location: 13256 - 14815 (+)
Gene ID: k141_218838_13
Type: TF
Location: 14868 - 15593 (-)
Gene ID: k141_218838_14
Type: TC
Location: 15678 - 16364 (-)
Gene ID: k141_218838_15
Type: STP
Location: 16391 - 17323 (-)
Gene ID: k141_218838_16
Type: pfam
Location: 17320 - 18315 (-)
Gene ID: k141_218838_17
Type: TC
Location: 18644 - 20023 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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