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Cluster: CGMR086362_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_168331 k141_168331_43 49082 50140 + CE8
TF k141_168331 k141_168331_44 50159 51796 + HTH_AraC | HTH_AraC
TC k141_168331 k141_168331_45 51861 53657 + 8.A.59.2.1
STP k141_168331 k141_168331_46 53647 54618 + Peripla_BP_1
TC k141_168331 k141_168331_47 54685 55722 + 3.A.1.2.3
pfam k141_168331 k141_168331_48 55881 57221 + Peripla_BP_4 | Peripla_BP_7
TC k141_168331 k141_168331_49 57319 58827 + 3.A.1.2.3
TC k141_168331 k141_168331_50 58843 60498 + 3.A.1.2.3
Gene ID: k141_168331_43
Type: CAZyme
Location: 49082 - 50140 (+)
Gene ID: k141_168331_44
Type: TF
Location: 50159 - 51796 (+)
Gene ID: k141_168331_45
Type: TC
Location: 51861 - 53657 (+)
Gene ID: k141_168331_46
Type: STP
Location: 53647 - 54618 (+)
Gene ID: k141_168331_47
Type: TC
Location: 54685 - 55722 (+)
Gene ID: k141_168331_48
Type: pfam
Location: 55881 - 57221 (+)
Gene ID: k141_168331_49
Type: TC
Location: 57319 - 58827 (+)
Gene ID: k141_168331_50
Type: TC
Location: 58843 - 60498 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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