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Cluster: CGMR086362_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_264485 k141_264485_6 5000 6772 - 9.B.33.1.1
STP k141_264485 k141_264485_7 6982 8337 + SBP_bac_1
TC k141_264485 k141_264485_8 8395 9288 + 3.A.1.1.11
TC k141_264485 k141_264485_9 9291 10136 + 3.A.1.1.11
pfam k141_264485 k141_264485_10 10133 11062 + Amidohydro_2
CAZyme k141_264485 k141_264485_11 11081 12481 + GH4
TC k141_264485 k141_264485_12 12950 13777 + 3.A.1.122.7
pfam k141_264485 k141_264485_13 13764 15602 + CARDB
TC k141_264485 k141_264485_14 15589 16977 + 3.A.1.122.12
pfam k141_264485 k141_264485_15 17237 17950 + IMP_cyclohyd
pfam k141_264485 k141_264485_16 17967 19145 + AICARFT_IMPCHas
TC k141_264485 k141_264485_17 19350 20687 + 2.A.66.1.25
Gene ID: k141_264485_6
Type: TC
Location: 5000 - 6772 (-)
Gene ID: k141_264485_7
Type: STP
Location: 6982 - 8337 (+)
Gene ID: k141_264485_8
Type: TC
Location: 8395 - 9288 (+)
Gene ID: k141_264485_9
Type: TC
Location: 9291 - 10136 (+)
Gene ID: k141_264485_10
Type: pfam
Location: 10133 - 11062 (+)
Gene ID: k141_264485_11
Type: CAZyme
Location: 11081 - 12481 (+)
Gene ID: k141_264485_12
Type: TC
Location: 12950 - 13777 (+)
Gene ID: k141_264485_13
Type: pfam
Location: 13764 - 15602 (+)
Gene ID: k141_264485_14
Type: TC
Location: 15589 - 16977 (+)
Gene ID: k141_264485_15
Type: pfam
Location: 17237 - 17950 (+)
Gene ID: k141_264485_16
Type: pfam
Location: 17967 - 19145 (+)
Gene ID: k141_264485_17
Type: TC
Location: 19350 - 20687 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_264485_16 vegetarian > vegan 1.04148 0.02695

🧭 Explore Read Mapping of CGC

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