Cluster: CGMR086362_CGC25
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR086362
- CGC Family ID: CGCFAM_00161
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_60649 | k141_60649_11 | 9695 | 10606 | + | 2.A.115.1.5 |
| TC | k141_60649 | k141_60649_12 | 10872 | 11984 | + | 3.A.1.1.22 |
| pfam | k141_60649 | k141_60649_13 | 12126 | 13214 | + | HTH_30 | GGDEF_2 |
| TC | k141_60649 | k141_60649_14 | 13229 | 13900 | + | 3.A.1.140.1 |
| pfam | k141_60649 | k141_60649_15 | 13970 | 14878 | + | FtsX | FtsX_ECD |
| STP | k141_60649 | k141_60649_16 | 14894 | 16102 | + | Peptidase_M23 |
| TC | k141_60649 | k141_60649_17 | 16145 | 17554 | + | 9.B.174.1.1 |
| CAZyme | k141_60649 | k141_60649_18 | 17761 | 20172 | + | GH94 |
| TF | k141_60649 | k141_60649_19 | 20230 | 20997 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | k141_60649 | k141_60649_20 | 21303 | 22682 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_60649 | k141_60649_21 | 22762 | 23712 | + | 3.A.1.1.4 |
| TC | k141_60649 | k141_60649_22 | 23726 | 24571 | + | 3.A.1.1.13 |
| CAZyme | k141_60649 | k141_60649_23 | 24587 | 27034 | + | GH3 |
Gene ID: k141_60649_11
Type: TC
Location: 9695 - 10606 (+)
Type: TC
Location: 9695 - 10606 (+)
Gene ID: k141_60649_12
Type: TC
Location: 10872 - 11984 (+)
Type: TC
Location: 10872 - 11984 (+)
Gene ID: k141_60649_13
Type: pfam
Location: 12126 - 13214 (+)
Type: pfam
Location: 12126 - 13214 (+)
Gene ID: k141_60649_14
Type: TC
Location: 13229 - 13900 (+)
Type: TC
Location: 13229 - 13900 (+)
Gene ID: k141_60649_15
Type: pfam
Location: 13970 - 14878 (+)
Type: pfam
Location: 13970 - 14878 (+)
Gene ID: k141_60649_16
Type: STP
Location: 14894 - 16102 (+)
Type: STP
Location: 14894 - 16102 (+)
Gene ID: k141_60649_17
Type: TC
Location: 16145 - 17554 (+)
Type: TC
Location: 16145 - 17554 (+)
Gene ID: k141_60649_18
Type: CAZyme
Location: 17761 - 20172 (+)
Type: CAZyme
Location: 17761 - 20172 (+)
Gene ID: k141_60649_19
Type: TF
Location: 20230 - 20997 (-)
Type: TF
Location: 20230 - 20997 (-)
Gene ID: k141_60649_20
Type:
Location: 21303 - 22682 (+)
Type:
Location: 21303 - 22682 (+)
Gene ID: k141_60649_21
Type: TC
Location: 22762 - 23712 (+)
Type: TC
Location: 22762 - 23712 (+)
Gene ID: k141_60649_22
Type: TC
Location: 23726 - 24571 (+)
Type: TC
Location: 23726 - 24571 (+)
Gene ID: k141_60649_23
Type: CAZyme
Location: 24587 - 27034 (+)
Type: CAZyme
Location: 24587 - 27034 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Enterocloster
Species
Enterocloster clostridioformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_60649_20 | vegan > omnivore | 1.63336 | 0.02445 |