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Cluster: CGMR086362_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_5337 k141_5337_33 39530 40372 - 3.A.1.1.20
TC k141_5337 k141_5337_34 40385 41272 - 3.A.1.1.20
TC k141_5337 k141_5337_35 41326 42627 - 3.A.1.1.20
CAZyme k141_5337 k141_5337_36 42645 44438 - GH32
TF k141_5337 k141_5337_37 44670 45644 - LacI
TC k141_5337 k141_5337_38 46147 47502 + 2.A.40.2.1
STP k141_5337 k141_5337_39 47847 50384 - Pyr_redox_2
pfam k141_5337 k141_5337_40 50718 51632 - AP_endonuc_2
CAZyme k141_5337 k141_5337_41 51643 52677 - GH179
TC k141_5337 k141_5337_42 52689 53651 - 3.A.1.2.13
TC k141_5337 k141_5337_43 53659 55140 - 3.A.1.2.13
TC k141_5337 k141_5337_44 55201 56307 - 3.A.1.2.13
Gene ID: k141_5337_33
Type: TC
Location: 39530 - 40372 (-)
Gene ID: k141_5337_34
Type: TC
Location: 40385 - 41272 (-)
Gene ID: k141_5337_35
Type: TC
Location: 41326 - 42627 (-)
Gene ID: k141_5337_36
Type: CAZyme
Location: 42645 - 44438 (-)
Gene ID: k141_5337_37
Type: TF
Location: 44670 - 45644 (-)
Gene ID: k141_5337_38
Type: TC
Location: 46147 - 47502 (+)
Gene ID: k141_5337_39
Type: STP
Location: 47847 - 50384 (-)
Gene ID: k141_5337_40
Type: pfam
Location: 50718 - 51632 (-)
Gene ID: k141_5337_41
Type: CAZyme
Location: 51643 - 52677 (-)
Gene ID: k141_5337_42
Type: TC
Location: 52689 - 53651 (-)
Gene ID: k141_5337_43
Type: TC
Location: 53659 - 55140 (-)
Gene ID: k141_5337_44
Type: TC
Location: 55201 - 56307 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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