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Cluster: CGMR086188_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_41972 k141_41972_120 136042 137484 + 2.A.66.1.32
STP k141_41972 k141_41972_121 137621 138553 - PfkB
STP k141_41972 k141_41972_122 138800 139378 + TetR_N
CAZyme k141_41972 k141_41972_123 139459 140817 + GH13_20
CAZyme k141_41972 k141_41972_124 140822 142762 + CBM48 | GH13_9
NULL(UNKNOWN) k141_41972 k141_41972_125 142944 143399 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_41972 k141_41972_126 143565 143981 + MarR
TC k141_41972 k141_41972_127 143995 145380 + 2.A.66.1.13
TC k141_41972 k141_41972_128 145402 146292 - 2.A.115.1.2
pfam k141_41972 k141_41972_129 146671 147759 + HTH_30 | GGDEF_2
TC k141_41972 k141_41972_130 147814 148503 + 3.A.1.140.1
pfam k141_41972 k141_41972_131 148556 149401 + FtsX | FtsX_ECD
STP k141_41972 k141_41972_132 149463 150683 + Peptidase_M23
TC k141_41972 k141_41972_133 150867 152078 + 9.B.174.1.2
pfam k141_41972 k141_41972_134 152555 152740 - DUF4177
pfam k141_41972 k141_41972_135 153241 154344 + Lactamase_B_2 | Lactamase_B_3
TC k141_41972 k141_41972_136 154405 154872 + 4.A.7.1.2
TC k141_41972 k141_41972_137 154908 156398 + 4.A.7.1.1
Gene ID: k141_41972_120
Type: TC
Location: 136042 - 137484 (+)
Gene ID: k141_41972_121
Type: STP
Location: 137621 - 138553 (-)
Gene ID: k141_41972_122
Type: STP
Location: 138800 - 139378 (+)
Gene ID: k141_41972_123
Type: CAZyme
Location: 139459 - 140817 (+)
Gene ID: k141_41972_124
Type: CAZyme
Location: 140822 - 142762 (+)
Gene ID: k141_41972_125
Type:
Location: 142944 - 143399 (-)
Gene ID: k141_41972_126
Type: TF
Location: 143565 - 143981 (+)
Gene ID: k141_41972_127
Type: TC
Location: 143995 - 145380 (+)
Gene ID: k141_41972_128
Type: TC
Location: 145402 - 146292 (-)
Gene ID: k141_41972_129
Type: pfam
Location: 146671 - 147759 (+)
Gene ID: k141_41972_130
Type: TC
Location: 147814 - 148503 (+)
Gene ID: k141_41972_131
Type: pfam
Location: 148556 - 149401 (+)
Gene ID: k141_41972_132
Type: STP
Location: 149463 - 150683 (+)
Gene ID: k141_41972_133
Type: TC
Location: 150867 - 152078 (+)
Gene ID: k141_41972_134
Type: pfam
Location: 152555 - 152740 (-)
Gene ID: k141_41972_135
Type: pfam
Location: 153241 - 154344 (+)
Gene ID: k141_41972_136
Type: TC
Location: 154405 - 154872 (+)
Gene ID: k141_41972_137
Type: TC
Location: 154908 - 156398 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_41972_135 vegetarian > vegan 1.25137 0.03761
k141_41972_137 vegetarian > omnivore 1.56719 0.02059

🧭 Explore Read Mapping of CGC

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