Cluster: CGMR086188_CGC31
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR086188
- CGC Family ID: CGCFAM_09072
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_38264 | k141_38264_31 | 36939 | 37202 | + | 4.A.2.1.19 |
| pfam | k141_38264 | k141_38264_32 | 37192 | 39903 | + | DUF2142 |
| NULL(UNKNOWN) | k141_38264 | k141_38264_33 | 39995 | 41527 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_38264 | k141_38264_34 | 41541 | 42680 | + | GT2 |
| CAZyme | k141_38264 | k141_38264_35 | 42688 | 43674 | + | GT2 |
| CAZyme | k141_38264 | k141_38264_36 | 43661 | 44779 | + | GT2 |
| TC | k141_38264 | k141_38264_37 | 44909 | 45706 | - | 3.A.1.34.1 |
| TC | k141_38264 | k141_38264_38 | 45709 | 46617 | - | 3.A.1.34.1 |
| pfam | k141_38264 | k141_38264_39 | 46657 | 47733 | - | ABC_sub_bind |
| pfam | k141_38264 | k141_38264_40 | 48235 | 50778 | - | YfhO |
| CAZyme | k141_38264 | k141_38264_41 | 50775 | 51569 | - | GT23 |
| pfam | k141_38264 | k141_38264_42 | 51749 | 54769 | + | GHMP_kinases_N | Fucose_pyrophosphorylase |
| CAZyme | k141_38264 | k141_38264_43 | 54820 | 56040 | + | GT4 |
| CAZyme | k141_38264 | k141_38264_44 | 56060 | 56812 | + | GT2 |
| CAZyme | k141_38264 | k141_38264_45 | 56846 | 57547 | + | GT2 |
Gene ID: k141_38264_31
Type: TC
Location: 36939 - 37202 (+)
Type: TC
Location: 36939 - 37202 (+)
Gene ID: k141_38264_32
Type: pfam
Location: 37192 - 39903 (+)
Type: pfam
Location: 37192 - 39903 (+)
Gene ID: k141_38264_33
Type:
Location: 39995 - 41527 (+)
Type:
Location: 39995 - 41527 (+)
Gene ID: k141_38264_34
Type: CAZyme
Location: 41541 - 42680 (+)
Type: CAZyme
Location: 41541 - 42680 (+)
Gene ID: k141_38264_35
Type: CAZyme
Location: 42688 - 43674 (+)
Type: CAZyme
Location: 42688 - 43674 (+)
Gene ID: k141_38264_36
Type: CAZyme
Location: 43661 - 44779 (+)
Type: CAZyme
Location: 43661 - 44779 (+)
Gene ID: k141_38264_37
Type: TC
Location: 44909 - 45706 (-)
Type: TC
Location: 44909 - 45706 (-)
Gene ID: k141_38264_38
Type: TC
Location: 45709 - 46617 (-)
Type: TC
Location: 45709 - 46617 (-)
Gene ID: k141_38264_39
Type: pfam
Location: 46657 - 47733 (-)
Type: pfam
Location: 46657 - 47733 (-)
Gene ID: k141_38264_40
Type: pfam
Location: 48235 - 50778 (-)
Type: pfam
Location: 48235 - 50778 (-)
Gene ID: k141_38264_41
Type: CAZyme
Location: 50775 - 51569 (-)
Type: CAZyme
Location: 50775 - 51569 (-)
Gene ID: k141_38264_42
Type: pfam
Location: 51749 - 54769 (+)
Type: pfam
Location: 51749 - 54769 (+)
Gene ID: k141_38264_43
Type: CAZyme
Location: 54820 - 56040 (+)
Type: CAZyme
Location: 54820 - 56040 (+)
Gene ID: k141_38264_44
Type: CAZyme
Location: 56060 - 56812 (+)
Type: CAZyme
Location: 56060 - 56812 (+)
Gene ID: k141_38264_45
Type: CAZyme
Location: 56846 - 57547 (+)
Type: CAZyme
Location: 56846 - 57547 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Laedolimicola
Species
Laedolimicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.