Cluster: CGMR086188_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR086188
- CGC Family ID: CGCFAM_00342
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_15429 | k141_15429_24 | 20495 | 21787 | + | 3.A.1.1.44 |
| TC | k141_15429 | k141_15429_25 | 21799 | 22695 | + | 3.A.1.1.11 |
| TC | k141_15429 | k141_15429_26 | 22709 | 23548 | + | 3.A.1.1.34 |
| CAZyme | k141_15429 | k141_15429_27 | 23581 | 25776 | + | GH36 |
| pfam | k141_15429 | k141_15429_28 | 25793 | 26251 | + | DUF6106 |
| CAZyme | k141_15429 | k141_15429_29 | 26282 | 28117 | + | GH13_4 |
| TC | k141_15429 | k141_15429_30 | 28253 | 29365 | + | 3.A.1.1.26 |
Gene ID: k141_15429_24
Type: TC
Location: 20495 - 21787 (+)
Type: TC
Location: 20495 - 21787 (+)
Gene ID: k141_15429_25
Type: TC
Location: 21799 - 22695 (+)
Type: TC
Location: 21799 - 22695 (+)
Gene ID: k141_15429_26
Type: TC
Location: 22709 - 23548 (+)
Type: TC
Location: 22709 - 23548 (+)
Gene ID: k141_15429_27
Type: CAZyme
Location: 23581 - 25776 (+)
Type: CAZyme
Location: 23581 - 25776 (+)
Gene ID: k141_15429_28
Type: pfam
Location: 25793 - 26251 (+)
Type: pfam
Location: 25793 - 26251 (+)
Gene ID: k141_15429_29
Type: CAZyme
Location: 26282 - 28117 (+)
Type: CAZyme
Location: 26282 - 28117 (+)
Gene ID: k141_15429_30
Type: TC
Location: 28253 - 29365 (+)
Type: TC
Location: 28253 - 29365 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Laedolimicola
Species
Laedolimicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.