Cluster: CGMR086188_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR086188
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_29558 | k141_29558_240 | 239538 | 240962 | + | 2.A.40.1.2 |
| CAZyme | k141_29558 | k141_29558_241 | 241156 | 242457 | - | GH3 |
| TC | k141_29558 | k141_29558_242 | 242454 | 243710 | - | 2.A.37.3.3 |
| pfam | k141_29558 | k141_29558_243 | 243745 | 245142 | - | Transpeptidase | PBP_dimer_2 |
| TC | k141_29558 | k141_29558_244 | 245150 | 246610 | - | 2.A.103.1.1 |
Gene ID: k141_29558_240
Type: TC
Location: 239538 - 240962 (+)
Type: TC
Location: 239538 - 240962 (+)
Gene ID: k141_29558_241
Type: CAZyme
Location: 241156 - 242457 (-)
Type: CAZyme
Location: 241156 - 242457 (-)
Gene ID: k141_29558_242
Type: TC
Location: 242454 - 243710 (-)
Type: TC
Location: 242454 - 243710 (-)
Gene ID: k141_29558_243
Type: pfam
Location: 243745 - 245142 (-)
Type: pfam
Location: 243745 - 245142 (-)
Gene ID: k141_29558_244
Type: TC
Location: 245150 - 246610 (-)
Type: TC
Location: 245150 - 246610 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Laedolimicola
Species
Laedolimicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.