Cluster: CGMR085844_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR085844
- CGC Family ID: CGCFAM_03261
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_236179 | k141_236179_57 | 58473 | 59828 | + | 1.A.26.1.2 |
| TC | k141_236179 | k141_236179_58 | 60127 | 60834 | + | 9.B.20.1.1 |
| peptidase | k141_236179 | k141_236179_59 | 60877 | 65799 | - | I39.008 |
| CAZyme | k141_236179 | k141_236179_60 | 66046 | 68367 | - | GT51 |
Gene ID: k141_236179_57
Type: TC
Location: 58473 - 59828 (+)
Type: TC
Location: 58473 - 59828 (+)
Gene ID: k141_236179_58
Type: TC
Location: 60127 - 60834 (+)
Type: TC
Location: 60127 - 60834 (+)
Gene ID: k141_236179_59
Type: peptidase
Location: 60877 - 65799 (-)
Type: peptidase
Location: 60877 - 65799 (-)
Gene ID: k141_236179_60
Type: CAZyme
Location: 66046 - 68367 (-)
Type: CAZyme
Location: 66046 - 68367 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Thiopseudomonas
Species
Thiopseudomonas sp012728415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.