Cluster: CGMR085844_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR085844
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_191294 | k141_191294_56 | 59595 | 62345 | - | 3.A.5.1.1 |
| pfam | k141_191294 | k141_191294_57 | 62526 | 62972 | + | DciA |
| STP | k141_191294 | k141_191294_58 | 63155 | 63712 | - | Pribosyltran |
| TC | k141_191294 | k141_191294_59 | 63779 | 65011 | - | 2.A.40.1.4 |
| STP | k141_191294 | k141_191294_60 | 65014 | 65652 | - | Pribosyltran |
| CAZyme | k141_191294 | k141_191294_61 | 65881 | 66792 | - | CE11 |
Gene ID: k141_191294_56
Type: TC
Location: 59595 - 62345 (-)
Type: TC
Location: 59595 - 62345 (-)
Gene ID: k141_191294_57
Type: pfam
Location: 62526 - 62972 (+)
Type: pfam
Location: 62526 - 62972 (+)
Gene ID: k141_191294_58
Type: STP
Location: 63155 - 63712 (-)
Type: STP
Location: 63155 - 63712 (-)
Gene ID: k141_191294_59
Type: TC
Location: 63779 - 65011 (-)
Type: TC
Location: 63779 - 65011 (-)
Gene ID: k141_191294_60
Type: STP
Location: 65014 - 65652 (-)
Type: STP
Location: 65014 - 65652 (-)
Gene ID: k141_191294_61
Type: CAZyme
Location: 65881 - 66792 (-)
Type: CAZyme
Location: 65881 - 66792 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Thiopseudomonas
Species
Thiopseudomonas sp012728415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.