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Cluster: CGMR085844_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_399713 k141_399713_7 5057 6160 - GT4
CAZyme k141_399713 k141_399713_8 6157 7362 - GT4
CAZyme k141_399713 k141_399713_9 7362 8687 - GH39
CAZyme k141_399713 k141_399713_10 8672 9847 - GT4
NULL(UNKNOWN) k141_399713 k141_399713_11 9847 11838 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_399713 k141_399713_12 12007 12765 - Poly_export
CAZyme k141_399713 k141_399713_13 12765 13673 - GT2
pfam k141_399713 k141_399713_14 13658 15130 - NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix
TC k141_399713 k141_399713_15 15130 16605 - 9.B.18.1.1
Gene ID: k141_399713_7
Type: CAZyme
Location: 5057 - 6160 (-)
Gene ID: k141_399713_8
Type: CAZyme
Location: 6157 - 7362 (-)
Gene ID: k141_399713_9
Type: CAZyme
Location: 7362 - 8687 (-)
Gene ID: k141_399713_10
Type: CAZyme
Location: 8672 - 9847 (-)
Gene ID: k141_399713_11
Type:
Location: 9847 - 11838 (-)
Gene ID: k141_399713_12
Type: pfam
Location: 12007 - 12765 (-)
Gene ID: k141_399713_13
Type: CAZyme
Location: 12765 - 13673 (-)
Gene ID: k141_399713_14
Type: pfam
Location: 13658 - 15130 (-)
Gene ID: k141_399713_15
Type: TC
Location: 15130 - 16605 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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