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Cluster: CGMR085163_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_132837 k141_132837_7 6615 7676 + GT4
TF k141_132837 k141_132837_8 7763 8233 + MerR
TC k141_132837 k141_132837_9 8270 8824 - 2.A.88.3.1
pfam k141_132837 k141_132837_10 9048 9941 + PseudoU_synth_2
TC k141_132837 k141_132837_11 9982 10701 - 1.A.8.13.3
TC k141_132837 k141_132837_12 10804 11532 - 1.A.8.13.3
TC k141_132837 k141_132837_13 11647 13716 - 3.A.3.5.2
TF k141_132837 k141_132837_14 13697 14104 - Pencillinase_R
TF k141_132837 k141_132837_15 14328 14693 + GntR
TC k141_132837 k141_132837_16 14690 15592 + 3.A.1.142.1
NULL(UNKNOWN) k141_132837 k141_132837_17 15592 16419 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_132837 k141_132837_18 16457 16759 + 3.A.1.124.6
Gene ID: k141_132837_7
Type: CAZyme
Location: 6615 - 7676 (+)
Gene ID: k141_132837_8
Type: TF
Location: 7763 - 8233 (+)
Gene ID: k141_132837_9
Type: TC
Location: 8270 - 8824 (-)
Gene ID: k141_132837_10
Type: pfam
Location: 9048 - 9941 (+)
Gene ID: k141_132837_11
Type: TC
Location: 9982 - 10701 (-)
Gene ID: k141_132837_12
Type: TC
Location: 10804 - 11532 (-)
Gene ID: k141_132837_13
Type: TC
Location: 11647 - 13716 (-)
Gene ID: k141_132837_14
Type: TF
Location: 13697 - 14104 (-)
Gene ID: k141_132837_15
Type: TF
Location: 14328 - 14693 (+)
Gene ID: k141_132837_16
Type: TC
Location: 14690 - 15592 (+)
Gene ID: k141_132837_17
Type:
Location: 15592 - 16419 (+)
Gene ID: k141_132837_18
Type: TC
Location: 16457 - 16759 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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