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Cluster: CGMR085163_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_148123 k141_148123_9 10308 11315 - GT4
CAZyme k141_148123 k141_148123_10 11316 12542 - GT4
TC k141_148123 k141_148123_11 12717 14498 - 3.A.1.135.8
TC k141_148123 k141_148123_12 14495 16216 - 3.A.1.135.8
CAZyme k141_148123 k141_148123_13 16390 17862 - GH13_18
TC k141_148123 k141_148123_14 17865 19055 - 2.A.1.68.1
pfam k141_148123 k141_148123_15 19249 19908 - His_Phos_1 | His_Phos_1
pfam k141_148123 k141_148123_16 19936 20598 - YfbR-like | HD_3
TC k141_148123 k141_148123_17 20602 23154 - 2.A.1.3.35
Gene ID: k141_148123_9
Type: CAZyme
Location: 10308 - 11315 (-)
Gene ID: k141_148123_10
Type: CAZyme
Location: 11316 - 12542 (-)
Gene ID: k141_148123_11
Type: TC
Location: 12717 - 14498 (-)
Gene ID: k141_148123_12
Type: TC
Location: 14495 - 16216 (-)
Gene ID: k141_148123_13
Type: CAZyme
Location: 16390 - 17862 (-)
Gene ID: k141_148123_14
Type: TC
Location: 17865 - 19055 (-)
Gene ID: k141_148123_15
Type: pfam
Location: 19249 - 19908 (-)
Gene ID: k141_148123_16
Type: pfam
Location: 19936 - 20598 (-)
Gene ID: k141_148123_17
Type: TC
Location: 20602 - 23154 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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