Cluster: CGMR085007_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR085007
- CGC Family ID: CGCFAM_08856
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_9014 | k141_9014_5 | 2598 | 3620 | - | GT28 |
| TC | k141_9014 | k141_9014_6 | 3617 | 4885 | - | 2.A.103.1.3 |
| pfam | k141_9014 | k141_9014_7 | 4928 | 6781 | + | Transpeptidase | PBP_dimer |
| TC | k141_9014 | k141_9014_8 | 6796 | 7308 | + | 3.D.1.8.1 |
| TC | k141_9014 | k141_9014_9 | 7350 | 8465 | - | 5.B.3.1.1 |
Gene ID: k141_9014_5
Type: CAZyme
Location: 2598 - 3620 (-)
Type: CAZyme
Location: 2598 - 3620 (-)
Gene ID: k141_9014_6
Type: TC
Location: 3617 - 4885 (-)
Type: TC
Location: 3617 - 4885 (-)
Gene ID: k141_9014_7
Type: pfam
Location: 4928 - 6781 (+)
Type: pfam
Location: 4928 - 6781 (+)
Gene ID: k141_9014_8
Type: TC
Location: 6796 - 7308 (+)
Type: TC
Location: 6796 - 7308 (+)
Gene ID: k141_9014_9
Type: TC
Location: 7350 - 8465 (-)
Type: TC
Location: 7350 - 8465 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Arcobacteraceae
Genus
Aliarcobacter
Species
Aliarcobacter cryaerophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.