Cluster: CGMR084277_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR084277
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_236947 | k141_236947_23 | 36527 | 39580 | + | 1.B.14.6.1 |
| pfam | k141_236947 | k141_236947_24 | 39594 | 41147 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_236947 | k141_236947_25 | 41161 | 42063 | + | Laminin_G_3 |
| CAZyme | k141_236947 | k141_236947_26 | 42140 | 43822 | + | GH144 |
| CAZyme | k141_236947 | k141_236947_27 | 43853 | 46141 | + | GH3 |
| CAZyme | k141_236947 | k141_236947_28 | 46151 | 47521 | + | GH144 |
| TC | k141_236947 | k141_236947_29 | 47663 | 48577 | - | 2.A.124.1.2 |
Gene ID: k141_236947_23
Type: TC
Location: 36527 - 39580 (+)
Type: TC
Location: 36527 - 39580 (+)
Gene ID: k141_236947_24
Type: pfam
Location: 39594 - 41147 (+)
Type: pfam
Location: 39594 - 41147 (+)
Gene ID: k141_236947_25
Type: pfam
Location: 41161 - 42063 (+)
Type: pfam
Location: 41161 - 42063 (+)
Gene ID: k141_236947_26
Type: CAZyme
Location: 42140 - 43822 (+)
Type: CAZyme
Location: 42140 - 43822 (+)
Gene ID: k141_236947_27
Type: CAZyme
Location: 43853 - 46141 (+)
Type: CAZyme
Location: 43853 - 46141 (+)
Gene ID: k141_236947_28
Type: CAZyme
Location: 46151 - 47521 (+)
Type: CAZyme
Location: 46151 - 47521 (+)
Gene ID: k141_236947_29
Type: TC
Location: 47663 - 48577 (-)
Type: TC
Location: 47663 - 48577 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp944321175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_236947_27 | vegan > omnivore | 1.07903 | 0.04230 |